Key features

MuscleMap provides four command-line tools:

• mm_segment for generating whole-body muscle and bone segmentations,
• mm_extract_metrics for computing region-wise quantitative metrics for muscle volume and intramuscular fat,
• mm_register_to_template to conduct standardized analysis for the 3D spatial distribution of intramuscular fat,
• mm_gui for visual inspection and quality control.

A video demonstration is provided below.

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Table of contents

• Segmentation
• Quantification
• Registration
• Graphical user interface